AutoPipe_tSNE: Implemented t-distributed stochastic neighbor embedding
In falafel19/AutoPipe: Automated Transcriptome Classifier Pipeline (AutoPipe): An R-Package for Comprehensive Transcriptome Analysis
Description
This function is used to upload a table into R for further use in the AutoPipe
Usage
1
AutoPipe_tSNE(me,perplexity=30,max_iter=500,groups_men)
Arguments
me
The path of the expression table
perplexity
numeric; Perplexity parameter
max_iter
integer; Number of iterations (default: 1000)
groups_men
the data frame with the group clustering that the function Groups_Sup or top_supervised (2. place on the list) returns with
the data about each sample and its coressponding cluster.
falafel19/AutoPipe documentation built on May 15, 2019, 2:51 a.m.
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Description
This function is used to upload a table into R for further use in the AutoPipe
Usage
1 | AutoPipe_tSNE(me,perplexity=30,max_iter=500,groups_men)
|
Arguments
me |
The path of the expression table |
perplexity |
numeric; Perplexity parameter |
max_iter |
integer; Number of iterations (default: 1000) |
groups_men |
the data frame with the group clustering that the function Groups_Sup or top_supervised (2. place on the list) returns with the data about each sample and its coressponding cluster. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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