findstk: Optimize stkmod function within depth interval
In fawda123/EstuaryMetabolism: Estimate metabolic rates in estuaries

Description Usage Arguments Details Value

Optimize stkmod function within depth interval

1	findstk(profin, sigdiff = 3, expand = 100, plot = FALSE)

`profin`	`data.frame` of a single depth profile
`sigdiff`	numeric of density difference beyond which the model is estimated
`expand`	numeric for expansion factor to increase resolution of search
`plot`	logical if the model is plotted

This function finds the optimal value for strt in stkmod that minimizes RMSE for the stick model. The function will return the maximum depth value in profin if the range of seawater densities is less than sigdiff, implying no stratification.

The profin data frame must have two columns for depth (binmd) and seawater density (sig).

The depth of the mixing layer if plot = FALSE, otherwise a plot of the stick model.

fawda123/EstuaryMetabolism documentation built on May 16, 2019, 10:57 a.m.