Description Usage Arguments Value
Extrapolate pilot data. Takes an input pilot dataset and extrapolates it to a desired size.
1 | extrapolateData(pilotdata, nreps, depth, design = NULL)
|
pilotdata |
Numeric count matrix; pilot dataset to be extrapolated to a desired larger size. |
nreps |
Desired number of replicates per group in extrapolated data. |
depth |
Desired depth (in millions) for each sample/replicate in extrapolated data. |
design |
Model matrix (without an intercept) that you would like to simulate from |
groups.pilot |
Vector or factor giving the experimental group/condition for each sample/library in the pilot dataset. If not provided, groups are assumed equally divided. |
Extrapolated dataset, given pilot data
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