Considering the class of the argument which is passed to plot, the graphical output differs.
signature(x = "micro_array", y = "ANY",...)
a micro\_array object
a vector of cutoff at which the network should be shown
signature(x = "network", y = "ANY",...)
a network object
a vector giving the group of each gene
what graphic should be plotted: either "F" (for a representation of the matrices F) or "network".
the level of cutoff. Defaut to 0.
using the “position” function, you can fix the position of the nodes
a vector defining the color of the vertex
vector giving the size of the plot. Default to c(2000,1000). The animation can only be created in the working directory. See the help page of the animation method.
if ani is TRUE and video is TRUE, the animation result is a GIF video
vector defining the vertex labels
position of the legend
color of the frames
logical ; if TRUE only the hubs are labeled
size of the arrows ; default to 0.7
edge thickness ; default to 1.
signature(x = "micropredict", y = "ANY",...)
a micropredict object
Optionnal arguments: see plot for network
Bertrand Frederic, Myriam Maumy-Bertrand.
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