Files in fbreitwieser/isobar

Analysis and quantitation of isobarically tagged MSMS proteomics data

R/IBSpectra-class.R R/IBSpectra-plots.R R/MSnSet-methods.R R/NoiseModel-class.R R/ProteinGroup-class.R R/Tlsd-class.R R/distr-methods.R R/isobar-import.R R/metareport-utils.R R/ptm-methods.R R/ratio-methods.R R/report-utils-tex.R R/report-utils-xls.R R/report-utils.R R/sharedpep-methods.R R/utils.R R/zzz.R README.md inst/pl/msgfpParser.R inst/report/create_ibspectra.R inst/report/create_meta_report.R inst/report/create_proteingroup.R inst/report/create_reports.R inst/report/meta-properties.R inst/report/properties.R man/IBSpectra-class.Rd man/NoiseModel-class.Rd man/ProteinGroup-class.Rd man/TlsParameter-class.Rd man/Tlsd-class.Rd man/calc.delta.score.Rd man/calc.startpos.Rd man/calculate-pvalues.Rd man/calculate.dNSAF.Rd man/calculate.emPAI.Rd man/correct.peptide.ratios.Rd man/distr-methods.Rd man/fit-distr.Rd man/getPeptideModifContext.Rd man/getPhosphoRSProbabilities.Rd man/getPtmInfo.Rd man/groupMemberPeptides.Rd man/human.protein.names.Rd man/isobar-analysis.Rd man/isobar-data.Rd man/isobar-import.Rd man/isobar-log.Rd man/isobar-package.Rd man/isobar-plots.Rd man/isobar-preprocessing.Rd man/isobar-reports.Rd man/maplot.protein.Rd man/number.ranges.Rd man/observedKnownSites.Rd man/peptide.count.Rd man/proteinInfo-methods.Rd man/proteinNameAndDescription.Rd man/ratio-summ.Rd man/ratiosReshapeWide.Rd man/reporter.protein-methods.Rd man/sanitize.Rd man/shared.ratios.Rd man/shared.ratios.sign.Rd man/specificities.Rd man/spectra.count2.Rd man/subsetIBSpectra.Rd man/utils.Rd man/writeHscoreData.Rd man/writeIBSpectra.Rd