README.md

In fbzwsqualitasag/qfmtchk: Check Format of Input Data Used for Genetic Evaluations

qfmtchk

The website of qfmtchk is available at: https://fbzwsqualitasag.github.io/qfmtchk/

The goal of qfmtchk is to provide functionalities related to checks and verification of input data for the genetic evaluations at Qualitas AG.

Installation

You can install the development version from GitHub with:

# install.packages("devtools")
devtools::install_github("fbzwsqualitasag/qfmtchk")

Example

This is a basic example which shows you how to solve a common problem:

library(qfmtchk)
## basic example code
s_sql_prg_path <- system.file("extdata", "zws_gal_pgb.sql", package = "qfmtchk")
tbl_gal_fmt <- extract_gal_fmt(ps_sql_prg_path = s_sql_prg_path)

The above produces a tibble with all column names and the width of the columns. This tibble can be improved and corrected at the users convenience with the following command

tbl_gal_fmt <- improve_fmt(ptbl_fmt = tbl_gal_fmt,
                           pvec_del_row_idx = 4:6,
                           ptbl_col_rename = tibble::tibble(RowIndex = c(3,6,9),
                                                            NewName=c("BlutanteilAnimal", 
                                                                      "BlutanteilVater", 
                                                                      "Traechtigkeitsdauer")))

The improved fmt-tibble can be written to an fmt-file using

s_gal_fmt_file <- "gal_check.fmt"
output_fmt(ps_fmt_outfile = s_gal_fmt_file, ptbl_fmt = tbl_gal_fmt)

Latest Changes: 2021-06-15 18:55:22 (pvr)

fbzwsqualitasag/qfmtchk documentation built on Dec. 20, 2021, 7:46 a.m.