README.md
In fchuffar/ptldata: A set of data dedicated to the ptlmapper R package
ptldata
A set of data dedicated to the ptlmapper R package.
Description
The ptldata package provides a set of data dedicated to the ptlmapper R package. It embeds simulated single cell values (phenotypes), each population of cells belonging to one of a set of individuals, and where the genotype of these individuals is also simulated. See Chuffart et al. PLoS Genetics 2016 for details.
Content of the package
Objects available in the package are:
indiv Description of the simulated individuals.cells Simulated single cell values (phenotypes).genodata Genotypes of the simulated individuals.
Installation
To get the current development version from github:
install.packages("devtools")
devtools::install_github("fchuffar/ptldata")
Usage
To learn on how to use this method, please go to the vignette of the package:
http://graal.ens-lyon.fr/~fchuffart/ptlmapper/inst/doc/simdata.html
Reference
Chuffart F, Richard M, Jost D, Burny C, Duplus-Bottin H, Ohya Y and Yvert G. Exploiting single-cell quantitative data to map genetic variants having probabilistic effects. PLoS Genetics 2016 (in revision)
fchuffar/ptldata documentation built on May 16, 2019, 12:07 p.m.
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ptldata
A set of data dedicated to the ptlmapper R package.
Description
The ptldata package provides a set of data dedicated to the ptlmapper R package. It embeds simulated single cell values (phenotypes), each population of cells belonging to one of a set of individuals, and where the genotype of these individuals is also simulated. See Chuffart et al. PLoS Genetics 2016 for details.
Content of the package
Objects available in the package are:
indivDescription of the simulated individuals.cellsSimulated single cell values (phenotypes).genodataGenotypes of the simulated individuals.
Installation
To get the current development version from github:
install.packages("devtools")
devtools::install_github("fchuffar/ptldata")
Usage
To learn on how to use this method, please go to the vignette of the package:
http://graal.ens-lyon.fr/~fchuffart/ptlmapper/inst/doc/simdata.html
Reference
Chuffart F, Richard M, Jost D, Burny C, Duplus-Bottin H, Ohya Y and Yvert G. Exploiting single-cell quantitative data to map genetic variants having probabilistic effects. PLoS Genetics 2016 (in revision)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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