Files in federicomarini/flowcatchR-release
Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells.
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/AllClasses.R
R/AllGenerics.R
R/auxiliary.R
R/flowcatchR.R
R/kinematics.R
R/postprocessing.R
R/preprocessing.R
R/show-methods.R
R/tracking.R
R/trajectories.R
README.md
data/MesenteriumSubset.RData
data/candidate.platelets.RData
inst/extdata/snapExp.jpg
inst/extdata/template_DetectionOfTransmigrationEvents.ipynb
inst/extdata/template_flowcatchR_vignetteSummary.ipynb
inst/shiny/ABOUT.md
inst/shiny/server.R
inst/shiny/ui.R
inst/shiny/www/logo_bioconductor.gif
inst/shiny/www/logo_unimedizin.png
man/Frames-class.Rd
man/Frames.Rd
man/KinematicsFeatures-class.Rd
man/KinematicsFeaturesSet-class.Rd
man/LinkedParticleSet-class.Rd
man/MesenteriumSubset.Rd
man/ParticleSet-class.Rd
man/TrajectorySet-class.Rd
man/add.contours.Rd
man/addParticles.Rd
man/axesInfo.Rd
man/candidate.platelets.Rd
man/channel.Frames.Rd
man/computeMSD.Rd
man/crop.Frames.Rd
man/export.Frames.Rd
man/export.particles.Rd
man/extractKinematics.traj.Rd
man/flowcatchR.Rd
man/initialize.LinkedParticleSet.Rd
man/inspect.Frames.Rd
man/kinematics.Rd
man/length.Frames.Rd
man/link.particles.Rd
man/matchTrajToParticles.Rd
man/normalizeFrames.Rd
man/particles.Rd
man/penaltyFunctionGenerator.Rd
man/plot.TrajectorySet.Rd
man/plot2D.TrajectorySet.Rd
man/preprocess.Frames.Rd
man/read.Frames.Rd
man/read.particles.Rd
man/repmat.Rd
man/rotate.Frames.Rd
man/select.Frames.Rd
man/select.particles.Rd
man/shinyFlow.Rd
man/show-Frames-method.Rd
man/show-KinematicsFeatures-method.Rd
man/show-KinematicsFeaturesSet-method.Rd
man/show-LinkedParticleSet-method.Rd
man/show-ParticleSet-method.Rd
man/show-TrajectorySet-method.Rd
man/snap.Rd
man/toCartesianCoords.Rd
man/toPolarCoords.Rd
man/trajectories.Rd
vignettes/flowcatchR-vignette.Rnw
vignettes/flowcatchR.bib
