biostatUZH-package: Misc Tools of the Department of Biostatistics, EBPI,...
In felix-hof/biostatUZH: Misc Tools of the Department of Biostatistics, EBPI, University of Zurich
biostatUZH-package R Documentation
Misc Tools of the Department of Biostatistics, EBPI, University of Zurich
Description
The package biostatUZH provides functions developed at the
Department of Biostatistics at the Epidemiology, Biostatisics and Prevention
Institute, University of Zurich, Switzerland. Covered topics include
confidence intervals (CIs) for proportions, CIs for operating characteristics of
diagnostic tests, Fagan-Nomogram, bootstrap CIs for the kappa coefficient,
intraclass-correlation coefficients including CIs, agreement for continuous
measurements (Bland-Altman plot), CI for the area under the curve (AUC),
Mantel-Haenszel estimator, Mantel-Cox hazard ratio estimator, CI for the
Kaplan-Meier estimate at given time points, CI for quantile of a
Kaplan-Meier or cumulative incidence estimate, sample size computations for
two-sample Mann-Whitney test, McNemar test, a binary diagnostic test,
natural re-parametrization of Weibull
output from survreg, hazard ratio and event time ratio interpretations, plot
to check the adequacy of the Weibull model.
Details
Most relevant functions:
agresti
behrens.test
blandAltman
clopperPearson
combineSubgroups
computeICCrater
confIntAUC
confIntAUCbinorm
confIntCorrelation
confIntDiagnostic
confIntICC
confIntIndependentAUCDiff
confIntIndependentDiagnostic
confIntIndependentProportion
confIntKappa
confIntKM
confIntMedian
confIntOddsRatio
confIntPairedAUCDiff
confIntPairedDiagnostic
confIntPairedProportion
confIntProportion
confIntRate
confIntRateDiff
confIntRateWald
confIntRateWilson
confIntRiskDiff
confIntRiskRatio
faganPlot
formatCI
formatPercent
formatPval
is.wholenumber
jeffreys
mantelCoxHR
mantelHaenszel
plotcorr
populationSamplePlot
power.z.test
printWaldCI
quantileCumInc
quantileKM
sampleSizeMcNemar
sampleSizeSurvival
sampleSizeWilcoxTwoSample
standardErrorAUC
standardErrorAUCDiff
summaryROC
survEvents
survreg2weibull
survReport
tableOR
tableRegression
wald
waldRate
weibullDiag
weibullReg
wilson
wilsonRate
Reexported functions:
ci2p
ci2estimate
ci2se
ci2z
z2p
p2z
Data sets:
fischdaten
larynx
wiedat2b
Author(s)
Maintainer: Felix Hofmann felix.hofmann2@uzh.ch (ORCID)
Authors:
Leonhard Held leonhard.held@uzh.ch (ORCID)
Florian Gerber florian.gerber@uzh.ch (ORCID)
Kaspar Rufibach kaspar.rufibach@gmail.com
Sarah R. Haile sarah.haile@uzh.ch
Sebastian Meyer seb.meyer@fau.de (ORCID)
Sina Rueeger
Simon Schwab simon.schwab@uzh.ch (ORCID)
Other contributors:
Daniel Sabanes Bove [contributor]
Uriah Daugaard [contributor]
See Also
felix-hof/biostatUZH documentation built on Sept. 27, 2024, 1:48 p.m.
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| biostatUZH-package | R Documentation |
Misc Tools of the Department of Biostatistics, EBPI, University of Zurich
Description
The package biostatUZH provides functions developed at the Department of Biostatistics at the Epidemiology, Biostatisics and Prevention Institute, University of Zurich, Switzerland. Covered topics include confidence intervals (CIs) for proportions, CIs for operating characteristics of diagnostic tests, Fagan-Nomogram, bootstrap CIs for the kappa coefficient, intraclass-correlation coefficients including CIs, agreement for continuous measurements (Bland-Altman plot), CI for the area under the curve (AUC), Mantel-Haenszel estimator, Mantel-Cox hazard ratio estimator, CI for the Kaplan-Meier estimate at given time points, CI for quantile of a Kaplan-Meier or cumulative incidence estimate, sample size computations for two-sample Mann-Whitney test, McNemar test, a binary diagnostic test, natural re-parametrization of Weibull output from survreg, hazard ratio and event time ratio interpretations, plot to check the adequacy of the Weibull model.
Details
Most relevant functions:
agresti
behrens.test
blandAltman
clopperPearson
combineSubgroups
computeICCrater
confIntAUC
confIntAUCbinorm
confIntCorrelation
confIntDiagnostic
confIntICC
confIntIndependentAUCDiff
confIntIndependentDiagnostic
confIntIndependentProportion
confIntKappa
confIntKM
confIntMedian
confIntOddsRatio
confIntPairedAUCDiff
confIntPairedDiagnostic
confIntPairedProportion
confIntProportion
confIntRate
confIntRateDiff
confIntRateWald
confIntRateWilson
confIntRiskDiff
confIntRiskRatio
faganPlot
formatCI
formatPercent
formatPval
is.wholenumber
jeffreys
mantelCoxHR
mantelHaenszel
plotcorr
populationSamplePlot
power.z.test
printWaldCI
quantileCumInc
quantileKM
sampleSizeMcNemar
sampleSizeSurvival
sampleSizeWilcoxTwoSample
standardErrorAUC
standardErrorAUCDiff
summaryROC
survEvents
survreg2weibull
survReport
tableOR
tableRegression
wald
waldRate
weibullDiag
weibullReg
wilson
wilsonRate
Reexported functions:
ci2p
ci2estimate
ci2se
ci2z
z2p
p2z
Data sets:
fischdaten
larynx
wiedat2b
Author(s)
Maintainer: Felix Hofmann felix.hofmann2@uzh.ch (ORCID)
Authors:
Leonhard Held leonhard.held@uzh.ch (ORCID)
Florian Gerber florian.gerber@uzh.ch (ORCID)
Kaspar Rufibach kaspar.rufibach@gmail.com
Sarah R. Haile sarah.haile@uzh.ch
Sebastian Meyer seb.meyer@fau.de (ORCID)
Sina Rueeger
Simon Schwab simon.schwab@uzh.ch (ORCID)
Other contributors:
Daniel Sabanes Bove [contributor]
Uriah Daugaard [contributor]
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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