CSmosquitoSp.analysis: CSmosquitoSp spatial analysis

In ffilipponi/CSmosquitoSp: Spatial analysis of Citizen Science mosquito reports

Description

This function perform spatial analysis for a selected AOI using data from the CSmosquitoSp DataBase

Usage

CSmosquitoSp.analysis(input_db, aoi, start_date, end_date, method = "CM",
  full_clean = FALSE, aoi_name = NULL, ...)

Arguments

input_db	DataFrame. Input CSmosquitoSp DataBase imported using function CSmosquitoSp.import.
aoi	Character. Area Of Interest where to perform the spatial analysis.
start_date	Character. Input start date, either an object of class Date or a character object with format 'YYYY-MM-DD'.
end_date	Character. Input end date, either an object of class Date or a character object with format 'YYYY-MM-DD'.
method	Character. Method to be used for the analysis. The following options are supported: 'CM' (Class Median), 'RC' (ReClass) (default to 'CM').
full_clean	Logical. Wheter the full cleaning of the input DataBase should be performed prior the analysis.
aoi_name	Character. Name for the Area Of Interest when 'aoi' argument is supplied as external file.
...	Additional arguments to be passed through to function CSmosquitoSp.analysis

Value

The function returns an object of class CSmosquitoSp.obj containing the following slots:

• points Report spatial points used for the analysis

• aoi Spatial polygons of the selected Area Of Interest containing the results from the spatial analysis

• aoi_name Name of the selected Area Of Interest

• start_date Start day selected for the analysis

• end_date End day selected for the analysis

• method Method used for the analysis (currently 'CM' and 'RC' are supported)

Author(s)

Federico Filipponi, Mattia Manica

See Also

CSmosquitoSp.plot CSmosquitoSp.export CSmosquitoSp.import

Examples

## Not run: 
# perform CSmosquitoSp spatial analysis
for the metropolitan area of the city of Rome
CSMS_roma <- CSmosquitoSp.analysis(input_db=input_db,
aoi="Roma", start_date="2017-09-01", end_date="2017-09-01")

# perform CSmosquitoSp spatial analysis using the 'full_clean' option
for the metropolitan area of the city of Rome
CSMS_roma_full_clean <- CSmosquitoSp.analysis(input_db=input_db,
aoi="Roma", start_date="2017-09-01", end_date="2017-09-01", full_clean=TRUE)

## End(Not run)

ffilipponi/CSmosquitoSp documentation built on July 2, 2020, 6:25 p.m.