Man pages for fgcz/rawR
Direct Access to Orbitrap Data and Beyond
| auc.rawrrChromatogram | deriving area under the curve (AUC) |
| basePeak | Base peak of a spectrum |
| buildRawrrExe | Build 'rawrr.exe' console application. |
| dependentScan | Retrieve dependent scan(s) of a scan listed in scan index |
| dot-checkDllInMonoPath | Check if a file is contained in the environment variable... |
| dot-thermofisherlsmsUrl | URL for Thermo Fisher .NET assemblies |
| faimsVoltageOn | Is FAIMS Voltage on? |
| filter | determine scan numbers which match a specified filter |
| installRawFileReaderDLLs | Download and install the New RawFileReader from Thermo Fisher... |
| installRawrrExe | Download and install the 'rawrr.exe' console application |
| is.rawrrChromatogram | Function to check if an object is an instance of class... |
| is.rawrrSpectrum | Function to check if an object is an instance of class... |
| is.rawrrSpectrumSet | Function to check if an object is an instance of class... |
| makeAccessor | Make accessor function for key value pair returned by... |
| massRange | Acquisition/scan range of spectrum |
| masterScan | Retrieve master scan of scan listed in scan index |
| new_rawrrSpectrum | Create instances of class 'rawrrSpectrum' |
| plot.rawrrChromatogram | Plot 'rawrrChromatogram' objects |
| plot.rawrrChromatogramSet | Plot 'rawrrChromatogramSet' objects |
| plot.rawrrSpectrum | Basic plotting function for instances of 'rawrrSpectrum' |
| print.rawrrSpectrum | Print method imitate the look and feel of Thermo Fisher... |
| rawrrAssemblyPath | Derives the path where all .NET assemblies are stored. |
| rawrr-package | rawrr: Direct Access to Orbitrap Data and Beyond |
| rawrrSpectrum | Create 'rawrrSpectrum' objects |
| readChromatogram | Extracts chromatographic data from a raw file. |
| readFileHeader | read file header Information |
| readIndex | Read scan index |
| readSpectrum | Reads spectral data from a raw file. |
| readTrailer | Read and extract scan trailer from TFS raw files. |
| sampleFilePath | A small file size 'sample.raw' BLOB |
| scanNumber | Accessor function for scan number of 'rawrrSpectrum' objects |
| summary.rawrrChromatogram | Text summary of chromatogram |
| summary.rawrrSpectrum | Basic summary function |
| tic | Total ion current of a spectrum |
| validate_rawrrIndex | Validate output of the readIndex function |
| validate_rawrrSpectrum | Validate instance of class rawrrSpectrum |
