prepareMutData: prepareMutData function

Description Usage Arguments Examples

View source: R/prepareMutData.R

Description

prepareMutData function

Usage

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prepareMutData(Data, SampleCol = "Sample", GeneCol = "Gene", InfoCol = "Info")

Arguments

Data

Data frame of mutation data

SampleCol

string - column name for samples

GeneCol

string - column name for gene names

InfoCol

string - column name for variant info (used to colour bar charts)

Examples

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## Pass the function a dataframe of mutation calls, and the names of the columns to use.
## Need the following columns: Sample, Gene, InfoCol
plotWaterfall(MutationPlot)
plotWaterfall(MutationPlot, SampleCol="Sample", GeneCol="Gene", InfoCol="Info")

findlaycopley/MutPlot documentation built on March 4, 2020, 5:02 p.m.