Description Usage Arguments Details Functions
Takes text files generated from Open Clinica and does some initial formatting saving them in an R format.
1 2 3 | importOpenClinica(txt, path, dates = NULL)
importOpenClinica_batch(path, trialStub, dbName, newFolder, delStub = "")
|
txt |
Filename |
path |
Filepath |
dates |
A vector of column names to convert to dates |
trialStub |
A string to filter unwanted files from the target folder |
dbName |
The file name for the .Rdata file will all the data contained within it |
delStub |
A string to remove off the data.frames if the names contain lots of unwanted duplication |
import.openClinica
creates a data.frame from a comma delimited file. Any column with the word date and any column named in the date variable in it is formatted to a POSIXct
date
(path,trialStub,dbName,newFolder,delStub="")
importOpenClinica_batch
: Runs importOpenClinica on a folder and saves to an .Rdata file.
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