compute_BETA_FromPlots: compute beta diversity from spectral species computed for a...

In floriandeboissieu/biodivMapR: biodivMapR: an R package for a- and ß-diversity mapping using remotely-sensed images

Description

compute beta diversity from spectral species computed for a plot expecting a matrix of spectral species (n pixels x p repetitions)

Usage

compute_BETA_FromPlots(SpectralSpecies_Plots, nbclusters, pcelim = 0.02)

Arguments

SpectralSpecies_Plots	list. list of matrices of spectral species corresponding to plots
nbclusters	numeric. number of clusters
pcelim	minimum contribution of spectral species to estimation of diversity each spectral species with a proprtion < pcelim is eliminated before computation of diversity

Value

Mean bray curtis dissimilarity matrix for all plots, and individual BC matrices corresponding to each repetitions

floriandeboissieu/biodivMapR documentation built on March 11, 2021, 8:46 a.m.