growth.biomass.indiv: Like growth.indiv but based on agb growth, not dbh growth.

Description Usage Arguments Details Arguments details

Description

Like growth.indiv() but based on agb growth, not dbh growth. Extreme growth rates (based on dbh growth) are excluded, but cases where the stemID changed are not excluded.

Usage

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growth.biomass.indiv(census1, census2, mindbh = 10, steminfo = FALSE,
  dbhunit = "mm", err.limit = 4, maxgrow = 75, rounddown = NULL,
  exclude.stem.change = TRUE, pomcut = 10000)

Arguments

census1

The R Analytical Table for a single census, either tree or stem.

census2

The matching R Analytical Table for a later census.

mindbh

The minimum diameter above which the counts are done. Trees smaller than mindbh are excluded. If NULL, all living trees are included.

dbhunit

'cm' or 'mm', only used for basal area

err.limit

A number. Numbers such as 10000 are high and will return all measures.

maxgrow

A number. Numbers such as 10000 are high and will return all measures.

rounddown

If TRUE, all dbh < 55 are rounded down to the nearest multiple of 5.

Details

Here pomcut is used in a very specific way probably only relevant at BCI. If the second pom is higher than the first by more than the pomcut, the record is not used. The function trim.growth() has already eliminated cases where the stemID is unchanged and pom changes, so this will only serve for cases where two different stemIDs have measurements. At BCI, in most cases where the second pom is lower than the first and the stem changed, it is a legitimate stem change. But where the second pom is higher, it is really the same stem measured at a different pom, and with a different stemID because BCI lacks stem tags.

For most plots, especially with stem tags, the default behavior means changes in stem allow changes in pom to be included in biomass growth.

Arguments details


forestgeo/ctfs documentation built on May 3, 2019, 6:44 p.m.