NEWS.md

In fossilsim/shiny: Shiny Application for 'FossilSim'

Version 1.1.2

Added Functionality

• Added more options for setting time intervals in time-dependent fossil sampling
• Added buttons to clear specific parts of the simulation
• Simulation functions now print information about the time spent and events simulated

UI changes

• Font size and colour of the time and depth axis have been updated to make the axis more visible.

Bug fixing

• Saving the plot no longer breaks when no data is present (instead a blank plot is saved)
• Taxonomy colours no longer change every time the plot is updated

Version 1.1.1

UI changes

• "Environment-dependent" model is now called "Depth-dependent" for clarity
• Better and more detailed error messages

Bug fixing

• Invalid Newick strings now give an error message instead of silently failing
• Simulating with tip number = 1 now works
• Plot is no longer cut at the bottom on smaller screens

Version 1.1.0

Added Functionality

• Plots can now be saved in PDF format
• The simulated can now be downloaded as RData for future reference

UI changes

• Clarified names of fossil input parameters

Bug fixing

• Added missing tooltips on fossil simulation functions
• Time intervals are now plotted according to the correct simulation model used

Version 1.0.0

General Functionalities

• Ability to generate fossil, taxonomy and phylogenetic tree data.
• User friendly interface.
• Fully deployable web app.

fossilsim/shiny documentation built on July 12, 2024, 5:42 a.m.