find_scigraph: #' Find entities using SciGraph API

In frequena/bioloupe: Interface with APIs related to biomedical Named-Entity recognition (NER) using R

Description

#' Find entities using SciGraph API

Usage

find_scigraph(text, include_category = NULL, exclude_category = NULL,
  min_length = 4, longest_only = FALSE, include_abbreviation = FALSE,
  include_acronym = FALSE, include_numbers = FALSE)

Arguments

text	text to annotate
include_category	include category
exclude_category	exclude category
min_length	minimum length of characters to annotate
longest_only	if two or more words overlap, take only the longest one
include_abbreviation	consider abbreviations in the text
include_acronym	consider acronyms in the text
include_numbers	consider numbers in the text

Value

the results from the search

Author(s)

Francisco Requena

Examples

## Not run: 
find_scigraph(text = 'Marfan syndrome the gene DLL', include_category = 'anatomical entity')

## End(Not run)

frequena/bioloupe documentation built on March 3, 2021, 12:32 a.m.