plot_phenotypes: plot phenotypes
In frhl/our: genetic data analysis
View source: R/plot_phenotypes.R
Description
A function that should be chained with get_phenotypes, to
produce phenotype relevant knockout plots.
Usage
1
plot_phenotypes(df, top = NULL, subset.dev = NULL)
Arguments
df
a data.farme with columns gene, value, sample, phenotype
top
if the data contains means (col 'mus'), then the top x genes
will be selected to be plotted.
subset.dev
Numeric. Subset by means that more extreme than this value (abs).
Assumes the data is sorted by t-distribution.
frhl/our documentation built on Feb. 5, 2021, 7:30 p.m.
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View source: R/plot_phenotypes.R
Description
A function that should be chained with get_phenotypes, to produce phenotype relevant knockout plots.
Usage
1 | plot_phenotypes(df, top = NULL, subset.dev = NULL)
|
Arguments
df |
a data.farme with columns gene, value, sample, phenotype |
top |
if the data contains means (col 'mus'), then the top x genes will be selected to be plotted. |
subset.dev |
Numeric. Subset by means that more extreme than this value (abs). Assumes the data is sorted by t-distribution. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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