README.md
In friedue/SCEdjvdj: Single-cell VDJ Tools for SCE objects
Functions for V(D)J sequencing data for SingleCellExperiment objects: SCEdjvdj
The folks at the RNA Bioscience Initiative have created the djvdj package that contains many useful functions for exploring V(D)J Sequencing data, usually obtained via 10X Genomics and CellRanger.
Here, I've done some very light editing to make the functions work with with SingleCellExperiment objects. Note that they will only work with SCE objects; if you insist on Seurat objects, use the original package.
The djvdj README contains some nice pointers on how to get started.
friedue/SCEdjvdj documentation built on April 21, 2021, 7:54 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Functions for V(D)J sequencing data for SingleCellExperiment objects: SCEdjvdj
The folks at the RNA Bioscience Initiative have created the djvdj package that contains many useful functions for exploring V(D)J Sequencing data, usually obtained via 10X Genomics and CellRanger.
Here, I've done some very light editing to make the functions work with with SingleCellExperiment objects. Note that they will only work with SCE objects; if you insist on Seurat objects, use the original package.
The djvdj README contains some nice pointers on how to get started.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.