Man pages for friedue/SCEdjvdj
Single-cell VDJ Tools for SCE objects
| calc_abundance | Calculate clonotype abundance |
| calc_similarity | Calculate repertoire similarity between clusters |
| dot-add_aes | Add list of aes params to ggplot object |
| dot-add_colData | Add additional entries to the colData of an SCE |
| dot-add_lm | Add regression line to ggplot object |
| dot-calc_abund | Calculate clonotype abundance |
| dot-create_bars | Create ggplot bar graph |
| dot-create_heatmap | Create ggplot heatmap |
| dot-set_lims | Set min and max values for column |
| dot-set_lvls | Set column levels |
| hello | Hello, World! |
| import_vdj | Import VDJ data to be added to an SCE object |
| pipe | Pipe operator |
| plot_abundance | Plot clonotype abundance |
| plot_similarity | Plot repertoire overlap |
| SCEdjvdj-package | SCEdjvdj: Single-cell VDJ Tools for SCE objects |
| tidyeval | Tidy eval helpers |
| tiny_sce | SingleCellExperiment object for tests |
| tiny_vdj | SingleCellExperiment object with V(D)J data for tests |
| vdj_theme | Theme for djvdj plotting functions |
