Man pages for frosinastojanovska/Bioinformatics
A collection of functions for Bioinformatics
| checkValidNucleobasesInDNA | Checks if given DNA sequence is composed with valid... |
| checkValidNucleobasesInRNA | Checks if given RNA sequence is composed with valid... |
| complement | Finds the complement of nucleobase in DNA or RNA. |
| createAligmentMatrix | Creates aligment matrix for given DNA sequences. |
| createProfileMatrix | Creates profile matrix for given aligment matrix. |
| findMotifWithConsensus | Finds score and consensus along with aligment and profile... |
| findRNAforDNA | Finds the mRNA sequence for given DNA sequence |
| geneticCoding | Codes some DNA codon into aminoacid. |
| geneticDecoding | Decodes given aminoacid to DNA codon/s. |
| getComplementaryStrand | Finds the complementary strand for given DNA strand |
| getStartPositionsWithMedianString | Finds score and consensus along with aligment and profile... |
| globalAligmentNucleotideSequence | Finds the optimal global nucleotide sequence aligment with... |
| globalAligmentProteinSequence | Finds the optimal global nucleotide sequence aligment with... |
| hammingDistance | Calculates hamming distance between two DNA sequences with... |
| localAligmentNucleotideSequence | Finds the optimal local nucleotide sequence aligment with... |
| localAligmentProteinSequence | Finds the optimal local nucleotide sequence aligment with... |
| RNAGeneticCoding | Codes some DNA codon into aminoacid. |
| RNAGeneticDecoding | Decodes given aminoacid to RNA codon/s. |
| translation | Finds all protein sequences for the given DNA sequence. First... |
