Man pages for functionalgenomics/atena
Analysis of Transposable Elements
| annotaTEs | Get RepeatMasker UCSC annotations |
| annotaTEsGetters | Getter functions of TE classes from parsed RepeatMasker... |
| atena-package | atena: analysis of transposable elements in R and... |
| atenaParam-class | atena parameter class |
| ERVmapParam-class | ERVmap parameter class |
| OneCodeToFindThemAll | OneCodeToFindThemAll parser of RepeatMasker annotations |
| ovFunctions | Pre-defined overlapping mode functions |
| qtex | Quantify transposable element expression |
| QuantifyParam-class | QuantifyParam parameter class |
| rmskatenaparser | atena annotation parser of RepeatMasker annotations |
| rmskbasicparser | Parser of RepeatMasker annotations |
| rmskidentity | Identity function for parsefun |
| TelescopeParam-class | Telescope parameter class |
| TEtranscriptsParam-class | TEtranscripts parameter class |
