matrix.sparse: Converts a dataframe to a sparsematrix. required for ploting...
In gb305/Rpackages:
Description
Usage
Arguments
Details
Value
Description
Converts a dataframe to a sparsematrix. required for ploting the HiC plots
Usage
1
matrix.sparse(input)
Arguments
input
A dataframe of HiC interactions
Details
matrix.sparse <- function (input){
i <- Matrix::Matrix(as.matrix(input), sparse = TRUE) # Converts dataframe back to a matrix and converts this to a sparseMatrix format
output = summary(i) #Expands back to a list
colnames(output)= c("V1","V2","V3")
return(output)
}
Value
A sparsematrix 3 columns.
gb305/Rpackages documentation built on Feb. 18, 2020, 2:55 p.m.
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Description Usage Arguments Details Value
Description
Converts a dataframe to a sparsematrix. required for ploting the HiC plots
Usage
1 | matrix.sparse(input)
|
Arguments
input |
A dataframe of HiC interactions |
Details
matrix.sparse <- function (input){
i <- Matrix::Matrix(as.matrix(input), sparse = TRUE) # Converts dataframe back to a matrix and converts this to a sparseMatrix format
output = summary(i) #Expands back to a list
colnames(output)= c("V1","V2","V3")
return(output)
}
Value
A sparsematrix 3 columns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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