Files in ge11232002/NGS
Next Generation Sequencing Data Analysis
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NGS.Rproj
R/CAGE.R
R/IO.R
R/bamMethods.R
R/bamPlots.R
R/fastq.R
R/mapMethods.R
R/util.R
README.md
inst/extdata/bam/nanocage_ACAGAT_carp_embryo.bam
inst/extdata/bam/nanocage_ACAGAT_carp_embryo.bam.bai
inst/extdata/fastq/nanocage_ACAGAT_carp_embryo_R1.fastq
inst/extdata/fastq/nanocage_ACAGAT_carp_embryo_R2.fastq
man/addInputReadCounts.Rd
man/bam2bigwig.Rd
man/bwaMem.Rd
man/fastUniq.Rd
man/getBamInputReadCount.Rd
man/getBamMultiMatching.Rd
man/getPairedReads.Rd
man/grepPatternList.Rd
man/makeAlignmentCountBarPlot.Rd
man/makeFragLengthHistPlot.Rd
man/makeSegmentCountHistPlots.Rd
man/sortIndexBam.Rd
man/trimFastq.Rd
tests/testthat.R
tests/testthat/test_fastq.R
tests/testthat/test_util.R
