ge11232002/TFMPvalue: Efficient and Accurate P-Value Computation for Position Weight Matrices

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. It is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. DOI: 10.1186/1748-7188-2-15.

Getting started

Package details

AuthorGe Tan <>
MaintainerGe Tan <>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
ge11232002/TFMPvalue documentation built on May 17, 2019, 12:13 a.m.