API for genevol-usp/hlaseqlib
R utility functions for the HLA RNAseq project
| Global functions | |
|---|---|
| alleles_to_groups | Source code |
| calc_genotyping_accuracy | Man page Source code |
| code_alleles | Source code |
| counts_to_fpkm | Man page Source code |
| counts_to_tpm | Man page Source code |
| fpkm_to_tpm | Man page Source code |
| get_gencode_coords | Man page Source code |
| hla_apply_zigosity_threshold | Man page Source code |
| hla_attribute_seq | Source code |
| hla_compile_index | Man page Source code |
| hla_format_sequence | Source code |
| hla_genotype | Man page Source code |
| hla_read_alignment | Man page Source code |
| hla_readtx | Man page Source code |
| hla_trimnames | Man page Source code |
| phase_hla | Man page Source code |
| read_phase | Man page Source code |
| read_phase_probs | Man page Source code |
| read_qtltools | Man page Source code |
| read_qtltools_rtc | Man page Source code |
