R/data.R

In genomics-kl/seurathelpeR: Helper Functions For Seurat V3

#' A Seurat object for testing.
#'
#' A Seurat object copied from the Seurat v3.0.2 data/. It is a subsetted version of 10X Genomics' 3k PBMC dataset.
#'
#'
#' @format A Seurat object:
#' \describe{
#'   \item{assays}{Contains a list of different assays. In this case, only 'RNA'.}
#'   \item{meta.data}{Meta data for cells.}
#'   ...
#' }
#'
#' @source \href{https://github.com/satijalab/seurat}{Seurat GitHub} \href{https://support.10xgenomics.com/single-cell-gene-expression/datasets/1.1.0/pbmc3k}{Original 10x data}
#'
#' @seealso \code{\link[Seurat]{pbmc_small}}
"pbmc_small"