genemodel: obtain GRanges for exons of named gene
In genomicsclass/ph525x: support functions and data for edX course PH525
genemodel R Documentation
obtain GRanges for exons of named gene
Description
obtain GRanges for exons of named gene
Usage
genemodel(sym, genome = "hg19",
annoResource = Homo.sapiens, getter = exonsBy, byattr = "gene")
Arguments
sym
symbol that can be resolved to ENTREZID for annoResource
genome
tag for genome build in use
annoResource
OrganismDbi or TxDb instance
getter
function to call to get exonRanges
byattr
attribute to use with getter
Value
GRanges instance
Examples
genemodel("NISCH")
genomicsclass/ph525x documentation built on July 16, 2022, 1:37 p.m.
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| genemodel | R Documentation |
obtain GRanges for exons of named gene
Description
obtain GRanges for exons of named gene
Usage
genemodel(sym, genome = "hg19", annoResource = Homo.sapiens, getter = exonsBy, byattr = "gene")
Arguments
sym |
symbol that can be resolved to ENTREZID for |
genome |
tag for genome build in use |
annoResource |
OrganismDbi or TxDb instance |
getter |
function to call to get exonRanges |
byattr |
attribute to use with |
Value
GRanges instance
Examples
genemodel("NISCH")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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