runQDNAseq: Run QNDAseq on bam files using previously determined...
In gerstung-lab/BarrettsProgressionRisk: Prognositc adenocarcinoma risk prediction for Barrett's Esophagus
Description
Usage
Arguments
Author(s)
Description
Run QNDAseq on bam files using previously determined parameters and output the required raw/filtered data files
Usage
1
2
runQDNAseq(bam = NULL, path = NULL, outputPath = NULL,
minMapQ = 37, binsize = 50)
Arguments
outputPath
Location to output resulting raw and fitted read files and plots
bamPath
Location with bam files to be processed using QDNAseq
Author(s)
skillcoyne
gerstung-lab/BarrettsProgressionRisk documentation built on June 22, 2021, 3:12 p.m.
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Description Usage Arguments Author(s)
Description
Run QNDAseq on bam files using previously determined parameters and output the required raw/filtered data files
Usage
1 2 | runQDNAseq(bam = NULL, path = NULL, outputPath = NULL,
minMapQ = 37, binsize = 50)
|
Arguments
outputPath |
Location to output resulting raw and fitted read files and plots |
bamPath |
Location with bam files to be processed using QDNAseq |
Author(s)
skillcoyne
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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