FishtrapCr | Diel DO and PCO2 data from Fishtrap Creek |
get.CO2Sys.TAlk_pCO2 | Calculate carbonate system from alkalinity and pCO2 |
get.CO2Sys.TAlk_TCO2 | Calculate carbonate system from alkalinity and DIC |
get.G | Calculate net gas flux of CO2 or O2 |
get.K0 | Calculates Henery's constant (mol/L/atm) |
get.K1 | Calculates the first dissociation constant of carbonic acid... |
get.K2 | Calculates the second dissociation constant of carbonic acid... |
get.OH | Calculates the hydroxide concentration in water (mol/L) |
get.P | Calculates in situ gross primary production (umol/L/timestep) |
get.PAR | Estimates Photosynthetically Active Radiation at the Earth's... |
get.R | Calculates in situ respiration (umol/L/timestep) |
get.Sc | Returns Schmidt number for a specific gas at a given... |
kstd.to.kt | temp |
main | Main control function for runnning the model |
metabolism | Calculate ecosytem metabolism and its effect on dissolved O2... |
openApp | Open Shiny app to experiment with toy model |
plotLegend | temp |
plotO2_CO2 | temp |
plotpH_DIC | temp |
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