Files in girke-lab/bioassayR
Cross-target analysis of small molecule bioactivity
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/AllClasses.R
R/AllGenerics.R
R/BioassayDB-accessors.R
R/bayesian-cross-reactivity.R
R/bioassay-accessors.R
R/bioassaySet-accessors.R
R/loadingData.R
R/queries.R
R/similarity.R
README.md
bioassayr.Rproj
data/samplebioassay.rda
inst/CITATION
inst/NEWS.Rd
inst/extdata/exampleAssay.xml
inst/extdata/exampleScores.csv
inst/extdata/sampleDatabase.sqlite
man/BioAssayDB-class.Rd
man/activeAgainst.Rd
man/activeTargets.Rd
man/addBioassayIndex.Rd
man/addDataSource.Rd
man/allCids.Rd
man/allTargets.Rd
man/assaySetTargets.Rd
man/bioactivityFingerprint.Rd
man/bioassay-class.Rd
man/bioassaySet-class.Rd
man/connectBioassayDB.Rd
man/crossReactivityProbability.Rd
man/disconnectBioassayDB.Rd
man/dropBioassay.Rd
man/dropBioassayIndex.Rd
man/getAssay.Rd
man/getAssays.Rd
man/getBioassaySetByCids.Rd
man/inactiveTargets.Rd
man/loadBioassay.Rd
man/loadIdMapping.Rd
man/newBioassayDB.Rd
man/parsePubChemBioassay.Rd
man/perTargetMatrix.Rd
man/queryBioassayDB.Rd
man/samplebioassay.Rd
man/scaleBioassaySet.Rd
man/screenedAtLeast.Rd
man/selectiveAgainst.Rd
man/targetSelectivity.Rd
man/translateTargetId.Rd
man/trinarySimilarity.Rd
tests/testthat.R
tests/testthat/test_bioactivityFingerprint.R
tests/testthat/test_crossReactivityProbability.R
tests/testthat/test_perTargetMatrix.R
tests/testthat/test_scaleBioassaySet.R
tests/testthat/test_targetSelectivity.R
tests/testthat/test_trinarySimilarity.R
vignettes/Makefile
vignettes/Makefile_bootstrap
vignettes/bibtex.bib
vignettes/bioassayR.Rmd
vignettes/figures/bioassayR.png
vignettes/figures/bioassayR.svg
vignettes/getBM.RData
vignettes/getids.RData
vignettes/header.html
vignettes/html.template_bootstrap
