setDefaultDistance: Set the default distance function for a descriptor type

In girke-lab/eiR-release: Accelerated similarity searching of small molecules

Description

Set the default distance function for a descriptor type. This is the distance function that will be used if none is given for a particular function call.

Usage

setDefaultDistance(descriptorType, distance)

Arguments

descriptorType	The type of the descriptor to set a distance function for. Built-in values are "ap" and "fp". Additional values can be set as well.
distance	A distance function taking two descriptor objects (as returned by toObject in a descriptor transform, see \ ink{addTransform} for details), and returning a distance value.

Value

No return value.

Author(s)

Kevin Horan

See Also

addTransform

Examples

	setDefaultDistance("ap", function(d1,d2) 1-cmp.similarity(d1,d2) )

girke-lab/eiR-release documentation built on May 17, 2019, 5:27 a.m.