coef.glm | Coefficient and Bias From Generalized Linear Model Fit |
fbrNBglm | Firth-Type Bias-Reduced Negative Binomial Log-Linear Model |
glmSolve | Generalized linear model (glm) solvers |
mockRNASeqData | A Simulated RNA-Seq Data Set |
NBDev | Fit a negative binomial GLM for given design matrix |
negbin | Negative Binomial Family |
nlSolve | Nonlinear equation solvers |
PoisDev | Compute Poisson deviances (up to a constant) for given design... |
QL.fit | Fit quasi-likelihood models to matrix of RNA-seq expression... |
QL.results | Obtain p-values and q-values using results from 'QL.fit' |
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