Man pages for giulianonetto/bayesdca
Bayesian Decision Curve Analysis
| bayesDCA-package | The 'bayesDCA' package. |
| compare_dca | Plot BayesDCA comparison |
| dca | Bayesian Decision Curve Analysis for Predictive Models and... |
| dca_surv | Bayesian Decision Curve Analysis for Survival outcomes |
| dca_survival_data | Survival Data for Bayesian DCA. |
| Docking2021Data | Survival data from Docking, 2021 - Figures 3B-3E |
| dot-dca_binary | Fit Bayesian Decision Curve Analysis using Stan for list of... |
| dot-dca_stan_surv_weibull | Fit Bayesian Decision Curve Analysis using Stan for survival... |
| dot-extract_dca_summary | Get summary from BayesDCA fit |
| dot-extract_dca_surv_draws | Get posterior draws from time-to-event DCA stanfit |
| dot-extract_dca_surv_summary | Extract posterior summaries for 'BayesDCASurv' object |
| dot-get_constant_prior_parameters | Get constant priors for Bayesian DCA |
| dot-get_prior_parameters | Get priors for Bayesian DCA |
| dot-get_relevant_pars | Get relevant parameters to parse from Stan output... |
| dot-get_thr_data_list | Get Threshold Performance Data for DCA list |
| dot-get_threshold_varying_prior_parameters | Get threshold-varying priors for Bayesian DCA |
| evpi | Compute Expected Value of Perfect Information (EVPI) |
| get_colors_and_labels | Get colors and labels for BayesDCA plots |
| get_cutpoints | Get cutpoints for survival estimation |
| get_delta_plot_data_binary | Get delta plot data for binary bayesDCA |
| get_delta_plot_data_surv | Get delta plot data for binary bayesDCA |
| get_events_per_interval | Get events per intervals defined by set of cutpoints |
| get_positivity_posterior_parameters | Get posterior parameters for positivity probability |
| get_superiority_prob_plot_data_binary | Get delta plot data for binary bayesDCA |
| get_superiority_prob_plot_data_surv | Get delta plot data for survival bayesDCA |
| get_survival_time_exposed | Get time exposed within each interval for a given prediction... |
| plot.BayesDCA | Plot BayesDCA |
| plot.BayesDCASurv | Plot BayesDCASurv |
| plot_delta | Plot BayesDCA delta |
| plot_evpi | Plot Expected Value of Perfect Information (EVPI) |
| plot_ppc | Plot prior predictive check for BayesDCA (binary case only) |
| plot_superiority_prob | Plot P(useful) from Wynants 2018 (doi: 10.1002/sim.7653) |
| PredModelData | Predictive Model Evaluation Data. |
| print.BayesDCA | Print BayesDCA |
| print.BayesDCASurv | Print BayesDCASurv |
| simulate_diagnostic_test_data | Simulate Diagnostic Test Data |
| simulate_prognostic_model_data | Simulate Prognostic Test Data |
