Man pages for gjgetzinger/cfmR
R Wrapper for calling the Competitive Fragmentation Modeling for Metabolite Identifiction (CFM-ID) algorithm
| adducts | Adduct ion table |
| alt_molform | Get alternate molecular formulas to account for possible... |
| cfm_id_precomputed | CFM-ID Precomupted |
| cfm_parse | Parse CFM precomputed spectra stored as raw vectors/binary... |
| cfm_parse_spec | Parse CFM precomputed spectra to R objects |
| cfm_predict | CFM-predict |
| cfm_predict_batch | Batch CFM prediction using a Linux cluster with a SLURM... |
| cfm_predict_readfile | Read cfm_predict results from output_filename |
| cfm_predict_stdout | Read cfm-predict standard output into R object |
| cfm_read_batch | Read results of batch CFM prediction |
| cfm_read_db | Read CFM precomputed spectra from a database created by... |
| cfm_search | Spectral similarity searching against a pre-computed CFM... |
| cfm_to_mzvault | Create a spectral library in mzVault format from CFM... |
| clean_form | Clean molecular formula |
| pipe | Pipe operator |
