txdb: Create a TxDb from a GenBank record
In gmbecker/genbankr: Parsing GenBank files into semantically useful objects
makeTxDbFromGenBank R Documentation
Create a TxDb from a GenBank record
Description
Create a TxDb object from a GenBankRecord.
Usage
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GenBankRecord'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GBAccession'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
Arguments
gbr
A GenBankRecord or GBAccession object
reassign.ids
logical. Passed down to makeTxDb
Value
A TxDb object
Examples
thing = readGenBank(system.file("unitTests/compjoin.gbk", package="genbankr"))
tx = makeTxDbFromGenBank(thing)
gmbecker/genbankr documentation built on Oct. 30, 2023, 9:24 a.m.
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| makeTxDbFromGenBank | R Documentation |
Create a TxDb from a GenBank record
Description
Create a TxDb object from a GenBankRecord.
Usage
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GenBankRecord'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
## S4 method for signature 'GBAccession'
makeTxDbFromGenBank(gbr, reassign.ids = FALSE)
Arguments
gbr |
A GenBankRecord or GBAccession object |
reassign.ids |
logical. Passed down to |
Value
A TxDb object
Examples
thing = readGenBank(system.file("unitTests/compjoin.gbk", package="genbankr"))
tx = makeTxDbFromGenBank(thing)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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