divime_classify_vox: run the DiViMe vocalization classification module 'vcm'
In gobbios/avutils: various utilities for DiViMe tools and audio processing

Description Usage Arguments Details Value

run the DiViMe vocalization classification module vcm

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divime_classify_vox(audio_loc, divime_loc, marvinator = TRUE,
  vmstart = TRUE, vmshutdown = TRUE, messages = TRUE,
  overwrite = FALSE)

`audio_loc`	character, path to the audio files
`divime_loc`	character, path to the DiViMe directory with running VM
`marvinator`	logical, look for Marvin's version of yunitator results, by default `TRUE`
`vmstart`	logical, perform a check whether the VM is running and if not start it up (by default `TRUE`). Turning this off, will speed up the function a little bit, but requires that you are sure that the VM is indeed running in `divime_loc`.
`vmshutdown`	logical, should the VM be shut down after the operations are done (by default `TRUE`)
`messages`	logical, should the file names of each processed file be printed
`overwrite`	logical, should output files be overwritten if they already exist (default is `FALSE`)

The marvinator= argument determines which kind of yunitator file is looked for. If TRUE the file looked for is 'yunitator_english_X.rttm', where X is the name of the underlying audio file (which is the result of divime_talkertype(..., marvinator = TRUE)). If FALSE the file looked for is 'yunitator_old_X.rttm' (which is the result of divime_talkertype(..., marvinator = FALSE)). If the respective file is not found, the function aborts.

The name of the resulting output also depends on the marvinator= argument. If FALSE, the output is 'vcm_X.rttm' and if TRUE it is 'vcm_marvinator_X.rttm'. Note that the latter is different from the behaviour of the underlying script vcm.sh, which in both cases returns the same output file name. I made this modification to avoid mix-ups.

a data.frame with the locations of the created rttm files and some diagnostics

gobbios/avutils documentation built on Feb. 19, 2020, 9:44 a.m.