plot.bayescomm: Plot bayescomm parameter chains

In goldingn/BayesComm: Bayesian Community Ecology Analysis

Description

plot.bayescomm creates summary plots of a subset of the parameter chains in a bayescomm object using the coda package.

Usage

## S3 method for class 'bayescomm'
plot(x, chain, ...)

Arguments

x	a bayescomm object
chain	a character string of the parameter chains to plot
...	further arguments to pass to plot.mcmc

Details

chain should be one of 'R' (for correlation coefficients) or 'B$sp' where sp is the species of interest (for regression coefficients).

See Also

BC, plot.mcmc

Examples

m1 <- example(BC)[[1]]
plot(m1, 'R')
plot(m1, 'B$sp1')

goldingn/BayesComm documentation built on May 17, 2019, 7:41 a.m.