kin_domain_locations: Human Kinase Domain Locations

In gomezlab/DarkKinaseTools: Tools for Interacting with Dark Kinase Data

Description

A dataset containing a list of human kinase domain start and stop locations. The start and stop locations are coded by the position within the kinase, so a 250 amino acid kinase domain might start at position 200 and continue to position 450. The undocumented columns in this data set are identical to the data in the all_kinases data set. I found it convenient to have these additional identifiers here as well.

Usage

kin_domain_locations

Format

A data frame with 516 rows and 8 columns

kinase_com_name

The name used on the kinase.com list, used for cross-referencing other lists from kinase.com

start

First amino acid in the kinase domain

stop

Last amino acid in the kinase domain

protein_length

Number of Amino Acids in this protein

hgnc_id

The ID number assigned by HGNC, formated as HGNC:#####

symbol

The human dark kinase name in HGNC

ensembl_gene_id

The ID assigned by ensembl, all start with ENSG

class

Either Light or Dark, using the IDG classifications

Source

http://kinase.com/

gomezlab/DarkKinaseTools documentation built on Feb. 28, 2021, 2:42 p.m.