API for gorillayue/RIPSeeker
RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments
| Global functions | |
|---|---|
| RIPSeeker | Man page |
| RIPSeeker-package | Man page |
| addDummyProb | Man page |
| addPseudoAlignment | Man page |
| annotateRIP | Man page |
| binCount | Man page |
| combineAlignGals | Man page |
| combineRIP | Man page |
| computeLogOdd | Man page |
| computeRPKM | Man page |
| disambiguateMultihits | Man page |
| empiricalFDR | Man page |
| evalBinSize | Man page |
| exportGRanges | Man page |
| galp2gal | Man page |
| getAlignGal | Man page |
| logScoreWithControl | Man page |
| logScoreWithoutControl | Man page |
| mainSeek | Man page |
| mainSeekSingleChrom | Man page |
| nbh | Man page |
| nbh.GRanges | Man page |
| nbh.integer | Man page |
| nbh_chk | Man page |
| nbh_em | Man page |
| nbh_gen | Man page |
| nbh_init | Man page |
| nbh_vit | Man page |
| nbm_chk | Man page |
| nbm_em | Man page |
| plotCoverage | Man page |
| plotStrandedCoverage | Man page |
| randindx | Man page |
| ripSeek | Man page |
| rulebaseRIPSeek | Man page |
| scoreMergedBins | Man page |
| seekRIP | Man page |
| selectBinSize | Man page |
| statdis | Man page |
| viewRIP | Man page |
