Description Usage Arguments Value
Performs HIPO eigendecomposition and calculates the z statistics and p-values of HIPO components.
1 2 |
sumstats.all |
Summary statitics of all individual traits, first output of |
traitvec |
Vector of trait names, second output of |
coherit.mat |
Genetic covariance matrix. |
ldscint.mat |
LD score regression intercept matrix. |
HIPOD.num |
Number of HIPO components to calculate z stats and p-value for. |
truncate |
Use only for high-dimensional phenotypes. If |
A list that contains
sumstats.all |
A data.frame containing the summary statistics of all individual traits. |
coherit.mat |
Genetic covariance matrix. |
ldscint.mat |
Matrix of LD score regression intercepts. |
eigenvalue |
Eigenvalues from HIPO eigendecomposition. Proportional to the average non-centrality parameter. |
HIPOD.mat |
A matrix of which the columns are the HIPO components. |
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