Man pages for grady/geophyttertools
Plotting tools for geophytter+ output
| apicomplexa.proj | Apicomplexa geophytter+ topology simplex |
| apicomplexa.tops | Apicomplexa geophytter+ topology simplex |
| as.hexagons | Expand hexagon centerpoint grid into hexagon vertices |
| coord_simplex | Special case of coord_fixed with aspect ratio set |
| corner_labels | Add labels to the corners of the simplex |
| count.topologies | Count the trees in x which match the topologies in y |
| geom_simplex | Special case of 'geom_polygon' for drawing the topology... |
| ggplot.geophytter | Convenience method for plotting the topology simplex |
| lungfish.proj | Lungfish sample projections onto locus of Frechet means |
| lungfish.tops | Lungfish geophytter+ topology simplex |
| read.projections | Read geophytter+ projections file |
| read.topologies | Read geophytter+ simplex topologies file |
| treegrid | Plot tree topologies from geophytter object |
