AllNewickNumbersByPartition: Generate All Unlabelled Trees Through Partitions
In graemetlloyd/hypRspace: Biological Hyperspace Functions
Description
Usage
Arguments
Details
Value
Author(s)
References
Examples
View source: R/AllNewickNumbersByPartition.R
Description
Generates all unlabelled rooted multifurcating trees of N tips.
Usage
1
Arguments
N
The required number of tips.
Details
Function works using notion in Felsenstein (2004) of applying partitions (combinatorics) to generate all possible sets of splits.
Note that currently this function fails to generate all possible trees past N = 7 so it is not recommended for use.
Value
A list of Newick number strings partitioned by number of internal nodes (1 to N - 1).
Author(s)
Graeme T. Lloyd graemetlloyd@gmail.com
References
Felsenstein 2004
Examples
1
2
# Generate all trees of five tips:
AllNewickNumbersByPartition(N = 5)
graemetlloyd/hypRspace documentation built on Aug. 24, 2020, 11:41 a.m.
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Description Usage Arguments Details Value Author(s) References Examples
View source: R/AllNewickNumbersByPartition.R
Description
Generates all unlabelled rooted multifurcating trees of N tips.
Usage
1 |
Arguments
N |
The required number of tips. |
Details
Function works using notion in Felsenstein (2004) of applying partitions (combinatorics) to generate all possible sets of splits.
Note that currently this function fails to generate all possible trees past N = 7 so it is not recommended for use.
Value
A list of Newick number strings partitioned by number of internal nodes (1 to N - 1).
Author(s)
Graeme T. Lloyd graemetlloyd@gmail.com
References
Felsenstein 2004
Examples
1 2 | # Generate all trees of five tips:
AllNewickNumbersByPartition(N = 5)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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