create_models: Create species distribution models

In grgurev/sdmflowR: What the Package Does (One Line, Title Case)

Description

This function runs biomod2 and create species distributions models based on user inputs. As prerequisite BIOMOD_FormatingData() needs to be run as well as environmental layers stack. This function just wraps around biomod2 functions BIOMOD_Modeling() and BIOMOD_EnsembleModeling() to produce models with consistent naming.

Usage

create_models(
  data,
  method,
  eval_metric_quality_threshold = NULL,
  nb_run_eval,
  path_to_bin = "bin/maxent.jar"
)

Arguments

data	(Biomod formatting object), Biomod formatted data that is produced as result from BIOMOD_FormattingData() function
method	(character), modelling method used to create model
eval_metric_quality_threshold	(number) If not NULL, the minimum scores below which models will be excluded of the ensemble-models building
nb_run_eval	(number), number of Evaluation runs
path_to_bin	(character), the link to maxent.jar file (the bin folder in working directory by default)

grgurev/sdmflowR documentation built on Feb. 26, 2021, 10:57 a.m.