plot_pathways: Plot Pathways
In grishagin/RIGplotbiopax: Plot BioPAX Pathways
Description
Usage
Arguments
Author(s)
View source: R/plot_pathways.R
Description
Takes in a BioPAX object and pathway ids, and prepares plots in an SVG format.
Usage
1
2
plot_pathways(biopax, pw_ids, tag = NULL, verbose = FALSE,
max_pw_size = 10000)
Arguments
biopax
A BioPAX object.
pw_ids
IDs of pathways to plot.
tag
Additional tag for the file name (optional).
verbose
Boolean. Show all warnings?
max_pw_size
Maximum allowed size of BioPAX data table. Defaults to 10,000.
If exceeded, pathway is split into several parts.
Author(s)
Ivan Grishagin
grishagin/RIGplotbiopax documentation built on May 5, 2019, 9:18 a.m.
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Description Usage Arguments Author(s)
View source: R/plot_pathways.R
Description
Takes in a BioPAX object and pathway ids, and prepares plots in an SVG format.
Usage
1 2 | plot_pathways(biopax, pw_ids, tag = NULL, verbose = FALSE,
max_pw_size = 10000)
|
Arguments
biopax |
A BioPAX object. |
pw_ids |
IDs of pathways to plot. |
tag |
Additional tag for the file name (optional). |
verbose |
Boolean. Show all warnings? |
max_pw_size |
Maximum allowed size of BioPAX data table. Defaults to 10,000. If exceeded, pathway is split into several parts. |
Author(s)
Ivan Grishagin
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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