| aging | Module for aging over time |
| arrival | arrival records the newly-infected individuals at the... |
| calculate_DALYs | Calculate Disability-Adjusted-Life-Years for each scenario... |
| cd4 | cd4 module |
| compare_table | Return comparison table |
| create_scenario_list | Parameters for agent-based model simulation |
| DALY_comparison | Making Daly Comparison plots |
| deaths | : departure module |
| deleteAttr | Delete the attribute of an individual 'deleteAttr' delete the... |
| extract_unaids | Extract data from a given pays from the UNAIDS database |
| init | initialize module |
| load_estimates | Load extracts from UNAIDS' website to usable estimates |
| make_pyramid | Making Age Pyramid |
| prep_life_tables | Preparing life-tables for simulation |
| prevalence | Prevalence module |
| proba_to_rate | 'proba_to_rate' transforms annual probability of a given... |
| result_comparison_plot | Module to produce graphical outputs to visualize simulations'... |
| run_abm | run_abm.R |
| run_simulations | run_simulation.R |
| setNewAttr | Assign attributes to the newly "created" individuals in the... |
| summary_outcomes | summarize the main health outcomes of the simulation |
| test | : test module |
| transmission | transmission module |
| trt | treatment module |
| vl | HIV viral load module |
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