Files in grunwaldlab/oomycetedbtools
Tools for managing the OomyceteDB website and database
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/configuration.R
R/release.R
R/utils.R
R/validate.R
README.Rmd
README.md
_pkgdown.yml
docs/404.html
docs/articles/database_format.html
docs/articles/database_format_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/database_format_files/header-attrs-2.9/header-attrs.js
docs/articles/index.html
docs/articles/update_procedure.html
docs/articles/update_procedure_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/update_procedure_files/crosstalk-1.1.1/css/crosstalk.css
docs/articles/update_procedure_files/crosstalk-1.1.1/js/crosstalk.js
docs/articles/update_procedure_files/crosstalk-1.1.1/js/crosstalk.js.map
docs/articles/update_procedure_files/crosstalk-1.1.1/js/crosstalk.min.js
docs/articles/update_procedure_files/crosstalk-1.1.1/js/crosstalk.min.js.map
docs/articles/update_procedure_files/header-attrs-2.9/header-attrs.js
docs/articles/update_procedure_files/htmlwidgets-1.5.3/htmlwidgets.js
docs/articles/update_procedure_files/jquery-3.5.1/jquery-AUTHORS.txt
docs/articles/update_procedure_files/jquery-3.5.1/jquery.js
docs/articles/update_procedure_files/jquery-3.5.1/jquery.min.js
docs/articles/update_procedure_files/jquery-3.5.1/jquery.min.map
docs/articles/update_procedure_files/plotly-binding-4.9.4.1/plotly.js
docs/articles/update_procedure_files/plotly-htmlwidgets-css-1.57.1/plotly-htmlwidgets.css
docs/articles/update_procedure_files/plotly-main-1.57.1/plotly-latest.min.js
docs/articles/update_procedure_files/typedarray-0.1/typedarray.min.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/apply_config_file.html
docs/reference/check_database_format.html
docs/reference/check_database_source_present.html
docs/reference/check_genbank_ids.html
docs/reference/check_sequence.html
docs/reference/check_sequence_ids.html
docs/reference/check_taxon_ids.html
docs/reference/config.html
docs/reference/find_config.html
docs/reference/find_release_dir.html
docs/reference/get_isolate_seqs.html
docs/reference/get_last_release.html
docs/reference/get_release_data.html
docs/reference/has_internet.html
docs/reference/index.html
docs/reference/init_database.html
docs/reference/make_blast_database.html
docs/reference/new_releases_data.html
docs/reference/parent_dir_paths.html
docs/reference/print_error_report.html
docs/reference/release.html
docs/reference/run_check.html
docs/reference/update_releases_spreadsheet.html
docs/reference/update_website.html
docs/reference/validate.html
man/apply_config_file.Rd
man/check_database_format.Rd
man/check_database_source_present.Rd
man/check_genbank_ids.Rd
man/check_sequence.Rd
man/check_sequence_ids.Rd
man/check_taxon_ids.Rd
man/config.Rd
man/find_config.Rd
man/find_release_dir.Rd
man/get_last_release.Rd
man/get_release_data.Rd
man/parent_dir_paths.Rd
man/print_error_report.Rd
man/release.Rd
man/run_check.Rd
man/validate.Rd
notes/meetings.Rmd
old_code/tools.R
old_code/update_website.R
oomycetedbtools.Rproj
scratch/2021-06-10_release_03_rps10.fasta
scratch/initialization.R
scratch/oomycetedb_source.ods
vignettes/.gitignore
vignettes/database_format.Rmd
vignettes/update_procedure.Rmd
