R/data.r

In gschofl/IPDdata: Allele data from from IPD-IMGT/HLA

#' HLA-A
#'
#' HLA-A data from IPD-IMGT/HLA v. 3.25.0.
#'
#' @docType data
#' @usage data(HLA_A)
#' @format An object of class \code{\link[hlatools]{HLAGene}}.
#' @keywords datasets
#' @source \href{https://www.ebi.ac.uk/ipd/}{IPD-IMGT/HLA}
#'
#' @examples
#' data(HLA_A)
#' HLA_A$get_locusname()
#' HLA_A$get_db_version()
#' HLA_A$get_reference_sequence("01:01:01:01")
#' HLA_A$get_alleles("01:01:01:01")
"HLA_A"

#' HLA-B
#'
#' HLA-B data from IPD-IMGT/HLA v. 3.25.0.
#'
#' @docType data
#' @usage data(HLA_B)
#' @format An object of class \code{\link[hlatools]{HLAGene}}.
#' @keywords datasets
#' @source \href{https://www.ebi.ac.uk/ipd/}{IPD-IMGT/HLA}
#'
#' @examples
#' data(HLA_B)
#' HLA_B$get_locusname()
#' HLA_B$get_db_version()
#' HLA_B$get_reference_sequence("07:02:02")
#' HLA_B$get_alleles("07:02:02")
"HLA_B"

#' HLA-C
#'
#' HLA-C data from IPD-IMGT/HLA v. 3.25.0.
#'
#' @docType data
#' @usage data(HLA_C)
#' @format An object of class \code{\link[hlatools]{HLAGene}}.
#' @keywords datasets
#' @source \href{https://www.ebi.ac.uk/ipd/}{IPD-IMGT/HLA}
#'
#' @examples
#' data(HLA_C)
#' HLA_C$get_locusname()
#' HLA_C$get_db_version()
#' HLA_C$get_reference_sequence("01:02:01")
#' HLA_C$get_alleles("01:02:01")
"HLA_C"

#' HLA-DPB1
#'
#' HLA-DPB1 data from IPD-IMGT/HLA v. 3.25.0.
#'
#' @docType data
#' @usage data(HLA_DPB1)
#' @format An object of class \code{\link[hlatools]{HLAGene}}.
#' @keywords datasets
#' @source \href{https://www.ebi.ac.uk/ipd/}{IPD-IMGT/HLA}
#'
#' @examples
#' data(HLA_DPB1)
#' HLA_DPB1$get_locusname()
#' HLA_DPB1$get_db_version()
#' HLA_DPB1$get_reference_sequence("01:01:01")
#' HLA_DPB1$get_alleles("01:01:01")
"HLA_DPB1"

#' HLA-DRB1
#'
#' HLA-DRB1 data from IPD-IMGT/HLA v. 3.25.0.
#'
#' @docType data
#' @usage data(HLA_DRB1)
#' @format An object of class \code{\link[hlatools]{HLAGene}}.
#' @keywords datasets
#' @source \href{https://www.ebi.ac.uk/ipd/}{IPD-IMGT/HLA}
#'
#' @examples
#' data(HLA_DRB1)
#' HLA_DRB1$get_locusname()
#' HLA_DRB1$get_db_version()
#' HLA_DRB1$get_reference_sequence("01:01:01")
#' HLA_DRB1$get_alleles("01:01:01")
"HLA_DRB1"

#' HLA-DQB1
#'
#' HLA-DQB1 data from IPD-IMGT/HLA v. 3.25.0.
#'
#' @docType data
#' @usage data(HLA_DQB1)
#' @format An object of class \code{\link[hlatools]{HLAGene}}.
#' @keywords datasets
#' @source \href{https://www.ebi.ac.uk/ipd/}{IPD-IMGT/HLA}
#'
#' @examples
#' data(HLA_DQB1)
#' HLA_DQB1$get_locusname()
#' HLA_DQB1$get_db_version()
#' HLA_DQB1$get_reference_sequence("05:01:01:01")
#' HLA_DQB1$get_alleles("05:01:01:01")
"HLA_DQB1"