eutil: eutil

In gschofl/rentrez: An R interface to the NCBI EUtilities

Description

“eutil” is an S4 class that is extended by the einfo, esearch, esummary, efetch, elink, epost, and egquery classes.

Details

These classes provide containers for the data returned from calls to the NCBI Entrez Utilities. Detailed information about the EUtilities provided by NCBI is available here.

Class hierarchy for eutil

Sub classes:

• einfo

• esearch

• esummary

• efetch

• epost

• elink

• egquery

• einfoDbList

• einfoDb

Generics with methods for eutil

• [* (4 methods defined for subclasses)

• [[* (1 methods defined for subclasses)

• c* (1 methods defined for subclasses)

• content (6 methods defined for subclasses)

• count* (3 methods defined for subclasses)

• database* (5 methods defined for subclasses)

• dbName* (1 methods defined for subclasses)

• description* (1 methods defined for subclasses)

• docsum* (1 methods defined for subclasses)

• error

• fields* (1 methods defined for subclasses)

• idList* (2 methods defined for subclasses)

• lastUpdate* (1 methods defined for subclasses)

• length* (1 methods defined for subclasses)

• links* (1 methods defined for subclasses)

• linkSet* (1 methods defined for subclasses)

• menuName* (1 methods defined for subclasses)

• queryKey* (3 methods defined for subclasses)

• queryTranslation* (1 methods defined for subclasses)

• queryUrl

• records* (1 methods defined for subclasses)

• retmax* (1 methods defined for subclasses)

• retmode* (1 methods defined for subclasses)

• retstart* (1 methods defined for subclasses)

• rettype* (1 methods defined for subclasses)

• show* (7 methods defined for subclasses)

• webEnv* (3 methods defined for subclasses)

• write* (1 methods defined for subclasses)

* = methods only defined for subclasses

Slots

url

A character vector containing the query URL.

error

Any error or warning messages parsed from the output of the call submitted to Entrez.

content

A character vector holding the unparsed contents of a request to Entrez.

gschofl/rentrez documentation built on May 17, 2019, 8:53 a.m.