md.trans: MaxDiff splicing ratios computation
In guigolab/sQTLseekeR2: R package for splicing QTL mapping
Description
Usage
Arguments
Value
Author(s)
Description
Compute the maximum difference in transcript relative expression
between genotype groups.
Usage
1
md.trans(sr.o, groups.o)
Arguments
sr.o
a matrix with the transcript relative expression (samples x transcripts).
groups.o
a factor with the genotype for each sample.
Value
A list with:
md
the maximum difference in splicing ratios between genotype groups.
tr.first, tr.second
the two transcripts that change the most.
Author(s)
Jean Monlong, Diego Garrido-Martín
guigolab/sQTLseekeR2 documentation built on Nov. 20, 2021, 3:21 a.m.
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Description Usage Arguments Value Author(s)
Description
Compute the maximum difference in transcript relative expression between genotype groups.
Usage
1 | md.trans(sr.o, groups.o)
|
Arguments
sr.o |
a matrix with the transcript relative expression (samples x transcripts). |
groups.o |
a factor with the genotype for each sample. |
Value
A list with:
md |
the maximum difference in splicing ratios between genotype groups. |
tr.first, tr.second |
the two transcripts that change the most. |
Author(s)
Jean Monlong, Diego Garrido-Martín
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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